stochrare.io.dataΒΆ

Classes

Database(path) A simple generic database class I use to cache the results from computations on simple stochastic systems to avoid making the same computations over and over again.
FirstPassageData(model[, path]) Specializing the above class for our specific use case: computing and storing first passage time realizations for stochastic models.
FirstPassageFP([path]) Specializing the above class for storing results from numerical integration of the adjoint FP equation.
TrajectoryData(model[, path]) Specialized database for storing realizations of reacting trajectories, indexed by their first-passage time.